Fix import paths and remove organ metaphors

- Update all `from storage.` imports to `from dss.storage.`
- Update `from config import config` to use `dss.settings`
- Update `from auth.` imports to `from dss.auth.`
- Update health check to use `dss.mcp.handler`
- Fix SmartMerger import (merger.py not smart_merger.py)
- Fix TranslationDictionary import path
- Fix test assertion for networkx edges/links
- Remove organ/body metaphors from:
  - API server health check
  - CLI status command and help text
  - Admin UI logger and error handler

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

admin-ui/js/core/logger.js

@@ -1,35 +1,28 @@
 /**
- * DSS Logger - Component Brain Consciousness System
+ * DSS Logger - Structured Logging System
  *
- * The DSS brain uses this logger to become conscious of what's happening.
- * Log levels represent the component's level of awareness and concern.
+ * Provides structured logging with categories and levels for the DSS admin UI.
  *
- * Framework: DSS Component Framework
- * See: docs/DSS_ORGANISM_GUIDE.md#brain
- *
- * Log Categories (Organ Systems):
- *   'heart'         - ❤️ Database operations and data persistence
- *   'brain'         - 🧠 Validation, analysis, and decision making
- *   'nervous'       - 🔌 API calls, webhooks, communication
- *   'digestive'     - 🍽️ Data ingestion, parsing, transformation
- *   'circulatory'   - 🩸 Design token flow and distribution
- *   'metabolic'     - ⚡ Style-dictionary transformations
- *   'endocrine'     - 🎛️ Theme system and configuration
- *   'immune'        - 🛡️ Validation, error detection, security
- *   'sensory'       - 👁️ Asset loading, Figma perception
- *   'skin'          - 🎨 UI rendering, Storybook output
- *   'skeleton'      - 🦴 Schema and structure validation
- *
- * Provides structured logging with biological awareness levels and optional remote logging.
+ * Log Categories:
+ *   'storage'       - Database operations and data persistence
+ *   'validation'    - Validation, analysis, and decision making
+ *   'api'           - API calls, webhooks, communication
+ *   'parser'        - Data ingestion, parsing, transformation
+ *   'tokens'        - Design token flow and distribution
+ *   'transform'     - Style-dictionary transformations
+ *   'config'        - Theme system and configuration
+ *   'security'      - Validation, error detection, security
+ *   'assets'        - Asset loading, Figma integration
+ *   'ui'            - UI rendering, Storybook output
+ *   'schema'        - Schema and structure validation
  */
 
-// Component awareness levels - how conscious is the system?
 const LOG_LEVELS = {
-  DEBUG: 0,    // 🧠 Deep thought - brain analyzing internal processes
-  INFO: 1,     // 💭 Awareness - component knows what's happening
-  WARN: 2,     // ⚠️ Symptom - component detected something unusual
-  ERROR: 3,    // 🛡️ Immune alert - component detected a threat
-  NONE: 4      // 🌙 Sleep - component is silent
+  DEBUG: 0,
+  INFO: 1,
+  WARN: 2,
+  ERROR: 3,
+  NONE: 4
 };
 
 class Logger {
@@ -76,23 +69,22 @@ class Logger {
       this.logs.shift();
     }
 
-    // Console output with component awareness emojis
-    const levelEmojis = {
-      DEBUG: '🧠',      // Brain thinking deeply
-      INFO: '💭',       // Component aware
-      WARN: '⚠️',       // Symptom detected
-      ERROR: '🛡️'      // Immune alert - threat detected
+    const levelIcons = {
+      DEBUG: '[D]',
+      INFO: '[I]',
+      WARN: '[W]',
+      ERROR: '[E]'
     };
 
     const colors = {
-      DEBUG: 'color: #666; font-style: italic',  // Gray, thoughtful
-      INFO: 'color: #2196F3; font-weight: bold',  // Blue, informative
-      WARN: 'color: #FF9800; font-weight: bold',  // Orange, warning
-      ERROR: 'color: #F44336; font-weight: bold'  // Red, critical
+      DEBUG: 'color: #666; font-style: italic',
+      INFO: 'color: #2196F3; font-weight: bold',
+      WARN: 'color: #FF9800; font-weight: bold',
+      ERROR: 'color: #F44336; font-weight: bold'
     };
 
-    const emoji = levelEmojis[level] || '🔘';
-    const prefix = `${emoji} [${category}]`;
+    const icon = levelIcons[level] || '[?]';
+    const prefix = `${icon} [${category}]`;
     const style = colors[level] || '';
 
     if (data) {
@@ -120,56 +112,49 @@ class Logger {
   }
 
   /**
-   * 🧠 DEBUG - Brain's deep thoughts
-   * Internal analysis and detailed consciousness
+   * DEBUG - Detailed internal information
    */
   debug(category, message, data) {
     this._log('DEBUG', category, message, data);
   }
 
   /**
-   * 💭 INFO - Component awareness
-   * The system knows what's happening, stays informed
+   * INFO - General information
    */
   info(category, message, data) {
     this._log('INFO', category, message, data);
   }
 
   /**
-   * ⚠️ WARN - Symptom detection
-   * Component detected something unusual but not critical
+   * WARN - Warning, something unusual detected
    */
   warn(category, message, data) {
     this._log('WARN', category, message, data);
   }
 
   /**
-   * 🛡️ ERROR - Immune alert
-   * Component detected a threat - critical consciousness
+   * ERROR - Error, something went wrong
    */
   error(category, message, data) {
     this._log('ERROR', category, message, data);
   }
 
   /**
-   * 📜 Get recent consciousness records
-   * Retrieve the component's recent thoughts and awareness
+   * Get recent log entries
    */
   getRecentLogs(count = 50) {
     return this.logs.slice(-count);
   }
 
   /**
-   * 🧠 Clear the mind
-   * Erase recent consciousness logs
+   * Clear all logs
    */
   clear() {
     this.logs = [];
   }
 
   /**
-   * 📤 Export consciousness
-   * Save the component's awareness to a file for analysis
+   * Export logs to file
    */
   export() {
     const dataStr = JSON.stringify(this.logs, null, 2);
@@ -185,13 +170,11 @@ class Logger {
 }
 
 /**
- * 🧠 ORGANISM CONSCIOUSNESS
- * Create the DSS component's brain - a singleton logger that tracks all awareness
+ * DSS Logger singleton
  */
 const logger = new Logger('DSS', 'INFO');
 
 // Set log level from localStorage or URL param
-// Allow tuning the component's consciousness level (awareness sensitivity)
 const urlParams = new URLSearchParams(window.location.search);
 const logLevel = urlParams.get('log') || localStorage.getItem('dss_log_level') || 'INFO';
 logger.setLevel(logLevel.toUpperCase());